Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921570.1_cds_XP_016470473.1_62917
CDS Infomation

[gene=LOC107792757] [db_xref=GeneID:107792757] [protein=calcium-dependent protein kinase 29-like] [protein_id=XP_016470473.1] [location=join(18640..19306,20636..20779,21018..21170,21393..21508,21712..21879,21998..22125,22220..22319,22407..22481)] [gbkey=CDS]
Sequence

ATGGGCATTTGTTTCACTAAAGATTTCTGGTTCAAAAAATGGCGTTCAATACCAATAACT
TCTCAAAAACAACCAGAAAAACCTTCACCACCACTTCCACCTCCAAAGCCAGTGATCCCT
TCTTTCAATACTATGCCAAGAAGTAATAGCAGTAATATTGGACCAATTTTGGGCAAGCCT
TACGTTGAAATTACAACCCTTTATGATCTTGACAAAGAACTTGGGCGAGGTCAATTTGGA
ATAACATATCTTTGTACTGACAAATCCACTGGATTAAAATATGCATGTAAATCTATATCC
ACAATAAAACTTGTAACTCCAAAGGATATAGAAGATGTTAGAAGGGAAATTATGATAATG
CAGTATTTGAGTGGACAGCCTAATATTGTTGAGTTCAAAGGTGCTTATGAGGACAAGAAT
AATCTACATTTGGTCATGGAGTTGTGTTGTGGTGGAGAGCTTTTTGATCGTATTACTGCA
AAAGGAAATTATTCTGAGAAAGAAGCTGCAAATATTGGAAGGCAAATTGTGAATGTTGTT
CATGTTTGTAATTTTATGGGAGTGATGCATAGAGATCTTAAACCTGAGAATTTCTTGATG
GTTAGTAAGGCTGAGGATTCTCCATTGAAGGCCACGGATTTTGGTCTCTCTGTTTTCATT
GAGGAAGGAAAAGTTTATAAGGATATTGTTGGAAGTGCATATTATGTGGCTCCTGAGGTG
TTACGGTATAACTATGGGACGGAGATAGACATCTGGAGTGCTGGAGTCATGTTATACATT
TTGTTGAGTGGTTTTCCTCCTTTCTCAGCTGAGACCGAAGAAGGAATATTTGAAGAGATA
CTTAAAGGCCACCTGGATCTTGAAAGCTCTCCCTGGCCTTCTATATCTGCCTCTGCAAAG
GATCTTGTCAAGAAAATGTTGACAGTGGATCCTAAGAGAAGGATCACTGCAGATCAAGCC
CTCGAACATCCATGGCTGAAGGAAGATGGTGAGGCCTCGGACAAGCCTATCGATAGTGCT
GTTTTGGTCAGGATGAAGCAATTCAGAGCAATGAACAAGATGAAAAAACTTGCTCTTAAG
GTTATTGCAGAGAATTTATCAGAAGAGGAAATCAAGGGACTTAAGCAAATGTTTAGCAAC
ATAGATACTGATGGAAGTGGTACAATCACATATGAAGAACTTAAAACTGGATTATCTAGG
CTAGGATCCAAGCTCACTGAATCAGAAATAAAGCAACTGATGGAAGCAGCTGATGTTGAC
AAAAGTGGGAGTATAGACTACATTGAGTTCATTACTGCTACAACGCATCGACACAGACTC
GAAAGAGAAGAAAACTTGTTCAAGGCTTTTCTGTATTTTGACAAGGATTGTAGTGGATTT
ATTACAAGAGATGAACTCAGACATGCTTTGACCGAGTACGGAATGGGGGATGAAGCTACA
ATCGATGAAATTCTTGATGACGTTGATACAGATAAGGATGGGAAAATTAACTATGATGAG
TTTGTTGCGATGATGAAAAGAGGTACGGTTGATGGTGAAGGAAATCATTGA

Peptide Sequence

PEP ID

XP_016470473.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 29-like [Nicotiana tabacum]
Sequence

MGICFTKDFWFKKWRSIPITSQKQPEKPSPPLPPPKPVIPSFNTMPRSNSSNIGPILGKP
YVEITTLYDLDKELGRGQFGITYLCTDKSTGLKYACKSISTIKLVTPKDIEDVRREIMIM
QYLSGQPNIVEFKGAYEDKNNLHLVMELCCGGELFDRITAKGNYSEKEAANIGRQIVNVV
HVCNFMGVMHRDLKPENFLMVSKAEDSPLKATDFGLSVFIEEGKVYKDIVGSAYYVAPEV
LRYNYGTEIDIWSAGVMLYILLSGFPPFSAETEEGIFEEILKGHLDLESSPWPSISASAK
DLVKKMLTVDPKRRITADQALEHPWLKEDGEASDKPIDSAVLVRMKQFRAMNKMKKLALK
VIAENLSEEEIKGLKQMFSNIDTDGSGTITYEELKTGLSRLGSKLTESEIKQLMEAADVD
KSGSIDYIEFITATTHRHRLEREENLFKAFLYFDKDCSGFITRDELRHALTEYGMGDEAT
IDEILDDVDTDKDGKINYDEFVAMMKRGTVDGEGNH

Transcript Sequence

Gene sequence data has not been registered.